BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB023C10SP1|AL428029
(992 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig929 1873 0.0
>3x_Contig929
Length = 3696
Score = 1873 bits (943), Expect = 0.0
Identities = 967/974 (99%), Gaps = 2/974 (0%)
Strand = Plus / Minus
Query: 1 gatcctctccataaaggttcagtaacgaacgatacttaacctgaagagtatcttcagcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2201 gatcctctccataaaggttcagtaacgaacgatacttaacctgaagagtatcttcagcat 2142
Query: 61 ctttacgtctggccagcttgtttgttaagacatccgtcatacttttcttagcccgaagtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2141 ctttacgtctggccagcttgtttgttaagacatccgtcatacttttcttagcccgaagtt 2082
Query: 121 ttttagtcagcactaatagccgttcttgtagatgttgaagcgccacatgtgcaccctccg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2081 ttttagtcagcactaatagccgttcttgtagatgttgaagcgccacatgtgcaccctccg 2022
Query: 181 cgggtttgacgtctgcctcctcttcgcttgatactacaatcacttgtgagtcctgctcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2021 cgggtttgacgtctgcctcctcttcgcttgatactacaatcacttgtgagtcctgctcca 1962
Query: 241 ttggtttaaagtgtttcaccagaggctgcagatgttctgcttctatttcatcgatctctc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1961 ttggtttaaagtgtttcaccagaggctgcagatgttctgcttctatttcatcgatctctc 1902
Query: 301 gcttcacaaatwacttcggcgtctcctgtctcttcaactcagaaactacttcgttttctt 360
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1901 gcttcacaaataacttcggcgtctcctgtctcttcaactcagaaactacttcgttttctt 1842
Query: 361 cctcctcctcagcatctagcgtgaggttaactacaggtatttctgctccattctctgtca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1841 cctcctcctcagcatctagcgtgaggttaactacaggtatttctgctccattctctgtca 1782
Query: 421 tctgtggtttattgcagtctcgtttcttgtttgatctctactgcaacggtggtgagcaga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1781 tctgtggtttattgcagtctcgtttcttgtttgatctctactgcaacggtggtgagcaga 1722
Query: 481 attcgtaaagtaaaattgaagcacaggcagtgcacctatccttgatctgttcgatatacc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1721 attcgtaaagtaaaattgaagcacaggcagtgcacctatccttgatctgttcgatatacc 1662
Query: 541 cctgctaaatcttcaaagtttagaacaggtaaacgtacaaataagaagaraatcaccaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1661 cctgctaaatcttcaaagtttagaacaggtaaacgtacaaataagaagaaaatcaccaaa 1602
Query: 601 acctttatgtgctattacagttgctgacagctactctgtttaangtgctataggcacttt 660
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1601 acctttatgtgctattacagttgctgacagctactctgtttaaagtgctataggcacttt 1542
Query: 661 gtactcgtcctttcacgcacgagaacacacagcttccttcgtgaagaactaactgattat 720
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1541 gtactcgtcctttcacgcacgaaaacacacagcttccttcgtgaagaactaactgattat 1482
Query: 721 aactgattaccttagtttagtttttttcgtaaaacagagatactcatgagcattctgtgt 780
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 1481 aactgattaccttagtttagtttttatcgtaaaacagagatactcatgagcattctgtgt 1422
Query: 781 ggaaaacaagaaaaaagcatcacgtgctgcattcagaacatgatcctcccagtcatcagg 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1421 ggaaaacaagaaaaaagcatcacgtgctgcattcagaacatgatcctcccagtcatcagg 1362
Query: 841 ttacggttacgtaaggcatggaataagataaaactaattatatttgcatagattgatatt 900
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1361 ttacggttacgtaaggcatggaataagataaaactaattatatttgcatagattgatatt 1302
Query: 901 cctggtacctgtggttagaagcgtccatcgccacggccaccatgg-cgccaggaccgccg 959
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1301 cctggtacctgtggttagaagcgtccatcgccacggccaccatggccgccaggaccgccg 1242
Query: 960 ggacccgccatggc 973
||| ||||||||||
Sbjct: 1241 gga-ccgccatggc 1229
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5714
Number of Sequences: 1807
Number of extensions: 5714
Number of successful extensions: 41
Number of sequences better than 1.0e-20: 1
length of query: 992
length of database: 10,358,551
effective HSP length: 16
effective length of query: 976
effective length of database: 10,329,639
effective search space: 10081727664
effective search space used: 10081727664
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)